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ggmsa (version 0.0.2)

Plot Multiple Sequence Alignment using 'ggplot2'

Description

Supports visualizing multiple sequence alignment of DNA and protein sequences using 'ggplot2'. It supports a number of colour schemes, including Chemistry, Clustal, Shapely, Taylor and Zappo. Multiple sequence alignment can easily be combined with other 'ggplot2' plots, such as aligning a phylogenetic tree produced by 'ggtree' with multiple sequence alignment.

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Version

Install

install.packages('ggmsa')

Monthly Downloads

24

Version

0.0.2

License

Artistic-2.0

Maintainer

Guangchuang Yu

Last Published

January 8th, 2020

Functions in ggmsa (0.0.2)

geom_msa

geom_msa
tidy_msa

tidy_msa
color_Clustal

A color scheme of Culstal.This function is a algorithm to assign colors for Multiple Sequence.
ggmsa

ggmsa