generate_nested_colors

Generate colors for nested grouping variables

internal

Provides a convenient way to analyze and visualize 'PICRUSt2' output with pre-defined plots and functions. Allows for generating statistical plots about microbiome functional predictions and offers customization options. Features a one-click option for creating publication-level plots, saving time and effort in producing professional-grade figures. Streamlines the 'PICRUSt2' analysis and visualization process. For more details, see Yang et al. (2023) <doi:10.1093/bioinformatics/btad470>.

Chen Yang

ggpicrust2

Make 'PICRUSt2' Output Analysis and Visualization Easier

generate_nested_colors function

<dl><dt>metadata</dt>
<dd>A data frame containing metadata</dd>
<dt>all_groups</dt>
<dd>A character vector of grouping variables</dd>
<dt>colors</dt>
<dd>A character vector of colors or NULL</dd></dl>

Arguments

Generate colors for nested grouping variables — generate_nested_colors

<dl>

<dt>metadata</dt>
<dd>A data frame containing metadata</dd>


<dt>all_groups</dt>
<dd>A character vector of grouping variables</dd>


<dt>colors</dt>
<dd>A character vector of colors or NULL</dd>

</dl>

generate_nested_colors: Generate colors for nested grouping variables

Description

Usage

Value

Arguments