auto_parse

Detect the structure string type and use the appropriate parser
to parse automatically.
Mixed types are supported.
Supported types:<ol>
<li>GlycoCT</li>
<li>IUPAC-condensed</li>
<li>IUPAC-extended</li>
<li>IUPAC-short</li>
<li>WURCS</li>
<li>Linear Code</li>
<li>pGlyco</li>
<li>StrucGP</li>
</ol>

Provides functions to parse glycan structure text representations
into 'glyrepr' glycan structures. Currently, it supports StrucGP-style,
pGlyco-style, IUPAC-condensed, IUPAC-extended, IUPAC-short, WURCS,
Linear Code, and GlycoCT format. It also provides an automatic parser
to detect the format and parse the structure string.

Bin Fu

glyparse

Parsing Glycan Structure Text Representations

auto_parse function

<dl><dt>x</dt>
<dd>A character vector of structure strings. NA values are allowed and will be returned as NA structures.</dd></dl>

Arguments

Automatic Structure Parsing — auto_parse

<dl>

<dt>x</dt>
<dd>A character vector of structure strings. NA values are allowed and will be returned as NA structures.</dd>

</dl>

auto_parse: Automatic Structure Parsing

Description

Usage

Value

Arguments

Examples