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glyparse

Parse different glycan structure text nomenclature into glyrepr::glycan_structure.

Currently, the following formats are supported: IUPAC-extended, IUPAC-condensed, IUPAC-short, WURCS, GlycoCT, StrucGP-style, pGlyco-style.

Installation

You can install the latest release of glyparse from CRAN:

install.packages("glyparse")

Or from r-universe:

install.packages('glyparse', repos = c('https://glycoverse.r-universe.dev', 'https://cloud.r-project.org'))

Or from GitHub:

remotes::install_github("glycoverse/glyparse@*release")

Or install the development version:

remotes::install_github("glycoverse/glyparse")

Documentation

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Install

install.packages('glyparse')

Monthly Downloads

335

Version

0.5.5

License

MIT + file LICENSE

Issues

Pull Requests

Stars

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Maintainer

Bin Fu

Last Published

February 4th, 2026

Functions in glyparse (0.5.5)

parse_iupac_extended

Parse IUPAC-extended Structures
parse_strucgp_struc

Parse StrucGP Structures
parse_iupac_short

Parse IUPAC-short Structures
parse_glycoct

Parse GlycoCT Structures
parse_linear_code

Parse Linear Code Structures
parse_iupac_condensed

Parse IUPAC-condensed Structures
parse_pglyco_struc

Parse pGlyco Structures
auto_parse

Automatic Structure Parsing
parse_wurcs

Parse WURCS Structures