parse_linear_code

Parse Linear Code structures into a <code>glyrepr::glycan_structure()</code>.
To know more about Linear Code, see <a href="https://www.jstage.jst.go.jp/article/tigg1989/14/77/14_77_127/_article">this article</a>.

Provides functions to parse glycan structure text representations
into 'glyrepr' glycan structures. Currently, it supports StrucGP-style,
pGlyco-style, IUPAC-condensed, IUPAC-extended, IUPAC-short, WURCS,
Linear Code, and GlycoCT format. It also provides an automatic parser
to detect the format and parse the structure string.

Bin Fu

glyparse

Parsing Glycan Structure Text Representations

parse_linear_code function

<dl><dt>x</dt>
<dd>A character vector of Linear Code strings. NA values are allowed and will be returned as NA structures.</dd></dl>

Arguments

Parse Linear Code structures into a <code>glyrepr::glycan_structure()</code>.
To know more about Linear Code, see <a href='https://www.jstage.jst.go.jp/article/tigg1989/14/77/14_77_127/_article'>this article</a>.

Parse Linear Code Structures — parse_linear_code

<dl>

<dt>x</dt>
<dd>A character vector of Linear Code strings. NA values are allowed and will be returned as NA structures.</dd>

</dl>

parse_linear_code: Parse Linear Code Structures

Description

Usage

Value

Arguments

Examples