graphite (version 1.12.0)

cytoscapePlot: Plot a pathway graph in Cytoscape

Description

Renders the topology of a pathway as a Cytoscape graph.

Usage

cytoscapePlot(pathway, ...)

Arguments

pathway

a pathway object.

...

optional arguments to pass to pathwayGraph.

Details

Requires the RCytoscape package.

See Also

pathway-class

pathwayGraph

Examples

## Not run: cytoscapePlot(convertIdentifiers(reactome$`Unwinding of DNA`, "symbol"))