haplo.ccs v1.3.1

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Estimate Haplotype Relative Risks in Case-Control Data

'haplo.ccs' estimates haplotype and covariate relative risks in case-control data by weighted logistic regression. Diplotype probabilities, which are estimated by EM computation with progressive insertion of loci, are utilized as weights.

Functions in haplo.ccs

Name Description
haplo Specify an Allele Matrix, Inheritance Mode, and Grouping for Rare Haplotypes
haplo.hpp Obtain Summaries of Phase Ambiguity
haplo.ccs Estimate Haplotype Relative Risks in Case-Control Data
renin Example Dataset for 'haplo.ccs'
sandcov Compute Sandwich Variance-Covariance Estimates
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Type Package
Date 2011-10-27
License GPL (>= 2)
Packaged 2012-10-29 08:58:55 UTC; ripley
Repository CRAN
Date/Publication 2012-10-29 08:58:55

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