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haplo.ccs (version 1.3.1)

Estimate Haplotype Relative Risks in Case-Control Data

Description

'haplo.ccs' estimates haplotype and covariate relative risks in case-control data by weighted logistic regression. Diplotype probabilities, which are estimated by EM computation with progressive insertion of loci, are utilized as weights.

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Version

Install

install.packages('haplo.ccs')

Monthly Downloads

179

Version

1.3.1

License

GPL (>= 2)

Maintainer

Benjamin French

Last Published

October 29th, 2012

Functions in haplo.ccs (1.3.1)

haplo

Specify an Allele Matrix, Inheritance Mode, and Grouping for Rare Haplotypes

haplo.hpp

Obtain Summaries of Phase Ambiguity

haplo.ccs

Estimate Haplotype Relative Risks in Case-Control Data

renin

Example Dataset for 'haplo.ccs'

sandcov

Compute Sandwich Variance-Covariance Estimates