Example Dataset for 'haplo.ccs'
This dataset serves as the example dataset for 'haplo.ccs'. The genotypes in this dataset were generated from haplotype frequency data for renin, one of the genes in the renin-angiotensin system.
'case': case-control status (1=Case, 0=Control)
'geno': a matrix of alleles indicating genotype where each locus has a pair of adjacent columns of alleles, and the order of columns corresponds to the order of the loci on the chromosome (1=A, 2=C, 3=T, 4=G)
'gender': gender (1=Male, 2=Female)
'age': age in years
'race': race (1=White, 2=Black, 3=Asian, 4=Other)
Other covariates, such as gender, age, and race were randomly generated. Therefore no scientific inference should be made from these data.
All variables are in numeric format.
French B, Lumley T, Monks SA, Rice KM, Hindorff LA, Reiner AP, Psaty BM. Simple estimates of haplotype relative risks in case-control data. Genetic Epidemiology 2006; 30(6):485-494.