get_rc_plots

Plot response curve. Average RU versus log10 of concentration. Color coded for concentrations selected for fitting.

Analysis of Surface Plasmon Resonance (SPR) and Biolayer Interferometry data, with automations for high-throughput SPR. This version of the package fits the 1: 1 binding model, with and without bulkshift. It offers optional local or global Rmax fitting. The user must provide a sample sheet and a Carterra output file in Carterra's current format. There is a utility function to convert from Carterra's old output format. The user may run a custom pipeline or use the provided 'Runscript', which will produce a pdf file containing fitted Rmax, ka, kd and standard errors, a plot of the sensorgram and fits, and a plot of residuals. The script will also produce a .csv file with all of the relevant parameters for each spot on the SPR chip.

Janice McCarthy Developer

htrSPRanalysis

Analysis of Surface Plasmon Resonance Data

Kan Li Dev

S. Moses Dennison 

Georgia D. Tomaras 

get_rc_plots function

<dl><dt>processed_input</dt>
<dd>Processed input object as returned from <code>process_input</code> function.</dd></dl>

Arguments

Plot response curve. Average RU versus log10 of concentration. Color coded for concentrations selected for fitting. — get_rc_plots

<dl>

<dt>processed_input</dt>
<dd>Processed input object as returned from <code>process_input</code> function.</dd>

</dl>

get_rc_plots: Plot response curve. Average RU versus log10 of concentration. Color coded for concentrations selected for fitting.

Description

Usage

Value

Arguments