chp2


This is an example BED File corresponding to the Ion AmpliSeq (TM) Cancer Hotspot Panel v2. It contains 207 regions that are frequently mutated in cancer.


datasets

Two methods for calculation of the number of required flows for semiconductor sequencing: 1. Using a simulation, the number of flows can be calculated for a concrete list of amplicons. 2. An exact combinatorial model is evaluated to calculate the number of flows for a random ensemble of sequences.

Michael Bockmayr

ionflows

Calculate the Number of Required Flows for Semiconductor
Sequencing

chp2 function

A data frame with 207 observations on 6 variables.

chp2: An example BED file.

Description

Usage

Arguments

Format

References

Examples