tefos03_afun

Analysis Function for TEFOS03 and Related Table Layouts

internal

Structure and formatting requirements for clinical trial table and listing outputs
vary between pharmaceutical companies. 'junco' provides additional tooling for use alongside
the 'rtables', 'rlistings' and 'tern' packages when creating table and listing outputs. While
motivated by the specifics of Johnson and Johnson Clinical and Statistical Programming's
table and listing shells, 'junco' provides functionality that is general and reusable.
Major features include a) alternative and extended statistical analyses beyond what 'tern'
supports for use in standard safety and efficacy tables, b) a robust production-grade
Rich Text Format (RTF) exporter for both tables and listings, c) structural support
for spanning column headers and risk difference columns in tables, and d) robust
font-aware automatic column width algorithms for both listings and tables.

Gabriel Becker

junco

Create Common Tables and Listings Used in Clinical Trials

tefos03_afun function

<dl><dt>df</dt>
<dd>(<code>data.frame</code>) data set containing all analysis variables.</dd>
<dt>.var</dt>
<dd>(<code>string</code>) single variable name that is passed by <code>rtables</code> when requested
by a statistics function.</dd>
<dt>.spl_context</dt>
<dd>(<code>data.frame</code>) gives information about ancestor split states
that is passed by <code>rtables</code>.</dd>
<dt>variables</dt>
<dd>(<code>list</code>) see <code>tern::fit_coxreg_multivar()</code> for required variable
specifications.</dd>
<dt>control</dt>
<dd>(<code>list</code>) from <code>tern::control_coxreg()</code>.</dd>
<dt>formats</dt>
<dd>(<code>list</code>) including <code>coef_se</code>, <code>hr_est</code>, <code>hr_ci</code> and <code>pval</code> formats.</dd></dl>

Arguments

Analysis Function for TEFOS03 and Related Table Layouts — tefos03_afun

<dl>

<dt>df</dt>
<dd>(<code>data.frame</code>) data set containing all analysis variables.</dd>


<dt>.var</dt>
<dd>(<code>string</code>) single variable name that is passed by <code>rtables</code> when requested
by a statistics function.</dd>


<dt>.spl_context</dt>
<dd>(<code>data.frame</code>) gives information about ancestor split states
that is passed by <code>rtables</code>.</dd>


<dt>variables</dt>
<dd>(<code>list</code>) see <code>tern::fit_coxreg_multivar()</code> for required variable
specifications.</dd>


<dt>control</dt>
<dd>(<code>list</code>) from <code>tern::control_coxreg()</code>.</dd>


<dt>formats</dt>
<dd>(<code>list</code>) including <code>coef_se</code>, <code>hr_est</code>, <code>hr_ci</code> and <code>pval</code> formats.</dd>

</dl>

tefos03_afun: Analysis Function for TEFOS03 and Related Table Layouts

Description

Usage

Arguments