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kdetrees (version 0.1.3)

Nonparametric method for identifying discordant trees

Description

Given a set of phylogenetic trees on a group of taxa (for example trees based on individual gene sequences), we present a method for identifying a subset of trees which are discordant with the other trees in the set. These discordant trees may arise from either biologically interesting phenomena (horizontal gene transfers, for example) or more mundane sequencing or annotation errors.

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Install

install.packages('kdetrees')

Monthly Downloads

31

Version

0.1.3

License

GPL-2

Maintainer

Last Published

August 21st, 2013

Functions in kdetrees (0.1.3)