kdetrees (version 0.1.3)

as.matrix.multiPhylo: dissimilarity map tree vectorization

Description

Dissimilarity maps convert trees to vectors using tip-to-tip path lengths. Branch length information may be optionally discarded (the default), resulting in vectors based solely on tree topology.

Usage

## S3 method for class 'multiPhylo':
as.matrix(x, ...)

Arguments

x

an ape::multiPhylo object.

...

additional options for ape::cophenetic.phylo

Value

• a row matrix of tree vectors

Examples

as.matrix(apicomplexa[1:5])