GSE54650

Data are based on total RNA, measured by microarray, obtained from livers of
wild-type mice at various times after transfer to constant darkness. To save
space and time, the data include only a subset of genes, and so are mainly
useful for examples of how to use <code>limorhyde2</code>.

datasets

Fit linear models based on periodic splines, moderate model
coefficients using multivariate adaptive shrinkage, then compute properties of
the moderated curves.

Jake Hughey

limorhyde2

Quantify Rhythmicity and Differential Rhythmicity in Genomic
Data

Dora Obodo

Elliot Outland

GSE54650 function

A list with two elements:<ul>
<li><code>y</code>: Matrix of normalized, log-transformed expression values. Rows
correspond to genes (rownames are Entrez Gene IDs) and columns to samples.</li>
<li><code>metadata</code>: <code>data.table</code> with one row per sample. <code>time</code> is in hours.</li>
</ul>

GSE54650: Gene expression data for GSE54650

Description

Usage

Arguments

Format

See Also