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maGUI (version 2.4)

clust: Clustering of Normalized Microarray Data

Description

Performs Clustering of normalized microarray data

Arguments

Details

Function can perform clustering on normalized microarray data if exists object of Affymetrix data as dat2Affy.m, Agilent_OneColor as datAgOne2.m, Agilent_TwoColor as datAgTwo2.m, Illumina_Beadarray as datIllBA2.m2, Illumina_Lumi as lumi_NQ.m, Nimblegen as data.matrix_Nimblegen2.m, Series_Matrix as data.matrixNorm.m and Online_Data as data.matrix_onlineNorm.m. The outputs are sample.dist_Affy and sample.clust_Affy for Affymetrix, sample.dist_Ag1 and sample.clust_Ag1 for Agilent_OneColor, sample.dist_Ag2 and sample.clust_Ag2 for Agilent_TwoColor, sample.dist_Il_B and sample.clust_Il_B for Illumina_Beadarray, sample.dist_Il_L and sample.clust_Il_L for Illumina_Lumi, sample.dist_N and sample.clust_N for Nimblegen, sample.dist_S and sample.clust_S for Series_Matrix and sample.dist_O and sample.clust_O for Online procedures.