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maGUI (version 2.4)

graph_gsta_goBP: Plots Graph of GO Terms for Biological Process of GSTA

Description

Plots a network graph of GO terms for Biological Process obtained from gene set test analysis.

Arguments

Details

Function can plot a graph for GO terms obtained from gene set test analysis. It is a network of GO terms of Biological Process as nodes and links as directed lines. It is performed if exists object GOtable.outBP_Affy for Affymetrix, GOtable.outBP_Ag1 for Agilent_OneColor, GOtable.outBP_Ag2 for Agilent_TwoColor, GOtable.outBP_Il_B for Illumina_Beadarray, GOtable.outBP_Il_L for Illumina_Lumi, GOtable.outBP_N for Nimblegen, GOtable.outBP_S for Series_Matrix and GOtable.outBP_O for Online procedures.