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maGUI (version 2.4)

graph_gsta_goCC: Plots Graph of GO Terms for Cellular Component of GSTA

Description

Plots a network graph of GO terms for Cellular Component obtained from gene set test analysis.

Arguments

Details

Function can plot a graph for GO terms obtained from gene set test analysis. It is a network of GO terms of Cellular Component as nodes and links as directed lines. It is performed if exists object GOtable.outCC_Affy for Affymetrix, GOtable.outCC_Ag1 for Agilent_OneColor, GOtable.outCC_Ag2 for Agilent_TwoColor, GOtable.outCC_Il_B for Illumina_Beadarray, GOtable.outCC_Il_L for Illumina_Lumi, GOtable.outCC_N for Nimblegen, GOtable.outCC_S for Series_Matrix and GOtable.outCC_O for Online procedures.