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malani (version 1.0)

Machine Learning Assisted Network Inference

Description

Find dark genes. These genes are often disregarded due to no detected mutation or differential expression, but are important in coordinating the functionality in cancer networks.

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Version

Install

install.packages('malani')

Monthly Downloads

157

Version

1.0

License

GPL-3

Maintainer

Mehrab Bari

Last Published

September 26th, 2016

Functions in malani (1.0)

intGenes

Select initial gene list from original data matrix.
pairmod

Find best performing pairs
grp

Gsvmod

G SVM models.
malanidata

Dataset for malani package
dat

A matrix of expression values.