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mclust (version 3.1-0)

Model-Based Clustering / Normal Mixture Modeling

Description

Model-based clustering and normal mixture modeling including Bayesian regularization

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Version

Install

install.packages('mclust')

Monthly Downloads

72,128

Version

3.1-0

License

See http://www.stat.washington.edu/mclust/license.txt

Maintainer

Chris Fraley

Last Published

February 23rd, 2024

Functions in mclust (3.1-0)

hcE

Model-based Hierarchical Clustering
cdensE

Component Density for a Parameterized MVN Mixture Model
mapClass

Correspondence between classifications.
nVarParams

Number of Variance Parameters in Gaussian Mixture Models
partuniq

Classifies Data According to Unique Observations
bicEMtrain

Select models in discriminant analysis using BIC
mclustOptions

Set default values for use with MCLUST.
emE

EM algorithm starting with E-step for a parameterized Gaussian mixture model.
me

EM algorithm starting with M-step for parameterized MVN mixture models.
estep

E-step for parameterized Gaussian mixture models.
mclustModelNames

MCLUST Model Names
em

EM algorithm starting with E-step for parameterized Gaussian mixture models.
plot.mclustDAtrain

Plot mclustDA training models.
plot.Mclust

Plot Model-Based Clustering Results
mstep

M-step for parameterized Gaussian mixture models.
mclustDAtest

MclustDA Testing
adjustedRandIndex

Adjusted Rand Index
plot.mclustBIC

BIC Plot
mstepE

M-step for a parameterized Gaussian mixture model.
hclass

Classifications from Hierarchical Agglomeration
emControl

Set control values for use with the EM algorithm.
sigma2decomp

Convert mixture component covariances to decomposition form.
mclustVariance

Template for variance specification for parameterized Gaussian mixture models.
summary.mclustModel

Summary Function for MCLUST Models
meE

EM algorithm starting with M-step for a parameterized Gaussian mixture model.
mclust2Dplot

Plot two-dimensional data modelled by an MVN mixture.
hc

Model-based Hierarchical Clustering
mclustBIC

BIC for Model-Based Clustering
sim

Simulate from Parameterized MVN Mixture Models
clPairs

Pairwise Scatter Plots showing Classification
coordProj

Coordinate projections of multidimensional data modeled by an MVN mixture.
cv1EMtrain

Select discriminant models using cross validation
summary.mclustDAtrain

Models and classifications from mclustDAtrain
uncerPlot

Uncertainty Plot for Model-Based Clustering
mvnX

Univariate or Multivariate Normal Fit
summary.mclustDAtest

Classification and posterior probability from mclustDAtest.
priorControl

Conjugate Prior for Gaussian Mixtures.
plot.mclustDA

Plotting method for MclustDA discriminant analysis.
mclust-internal

Internal MCLUST functions
partconv

Numeric Encoding of a Partitioning
mclustDAtrain

MclustDA Training
Defaults.Mclust

List of values controlling defaults for some MCLUST functions.
Mclust

Model-Based Clustering
classError

Classification error.
summary.mclustBIC

Summary Function for model-based clustering.
surfacePlot

Density or uncertainty surface for two dimensional mixtures.
cdens

Component Density for Parameterized MVN Mixture Models
simE

Simulate from a Parameterized MVN Mixture Model
dens

Density for Parameterized MVN Mixtures
mclustDA

MclustDA discriminant analysis.
mclustModel

Best model based on BIC.
bic

BIC for Parameterized Gaussian Mixture Models
estepE

E-step in the EM algorithm for a parameterized Gaussian mixture model.
map

Classification given Probabilities
mclust1Dplot

Plot one-dimensional data modeled by an MVN mixture.
randProj

Random projections of multidimensional data modeled by an MVN mixture.
hypvol

Aproximate Hypervolume for Multivariate Data
defaultPrior

Default conjugate prior for Gaussian mixtures.
decomp2sigma

Convert mixture component covariances to matrix form.
mvn

Univariate or Multivariate Normal Fit
unmap

Indicator Variables given Classification
cross

Simulated Cross Data
diabetes

Diabetes data
chevron

Simulated minefield data
wreath

Data Simulated from a 14-Component Mixture