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meteR (version 1.0)
Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)
Description
Fit and plot macroecological patterns predicted by the Maximum Entropy Theory of Ecology (METE).
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Version
1.2
1.1
1.0
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Install
install.packages('meteR')
Monthly Downloads
154
Version
1.0
License
GPL-2
Issues
1
Pull Requests
0
Stars
11
Forks
5
Repository
https://github.com/cmerow/meteR
Maintainer
Cory Merow
Last Published
November 24th, 2015
Functions in meteR (1.0)
Search functions
downscaleSAR
Downscale the species area relationship (SAR) or endemics area relationship (EAR)
ebar
Relationship between mean metabolic rate ($\bar{\epsilon}$) and abundance
print.damuth
print.damuth
plot.meteDist
Plot METE distributions and associated data
mseZ
Compute z-score of mean squared error
plot.damuth
Plot the relationship between abundance and metabolic rate, i.e. objects of class damuth
meteESF
meteESF
arth
Arthropod community abundance data
meteTheta
Equation of the PMF for the METE Intra-specific metabolic rate distribution
sipd
Generic method to obtain the species-level individual power distribution (SIPD)
empiricalSAR
Empirical SAR or EAR
meteSAR
Compute METE species area relationship (SAR)
logLikZ
Compute log-likelihood z-score
print.meteESF
print.meteESF
meteDist2Rank
meteDist2Rank
print.meteRelat
Print summaries of
meteRelat
objects
metePsi
Equation of the PMF for the METE individual metabolic rate distribution
upscaleSAR
upscale SAR
logLik.meteDist
Compute log-likelihood of a meteDist object
meteSSF
meteSSF
metePhi
Equation of the METE species abundance distribution
plot.meteRelat
Plot predicted METE relationships and associated observed relationship seen in data
print.meteDist
Print summaries of
meteDist
objects
print.sar
print.sar
residuals.meteDist
Compute residuals between METE predictions and date of a meteDist object
meteR-package
Analyses with the Maximum Entropy Theory of Ecology (METE)
ssad
Species Spatial Abundance Distribution
metePi
Equation of the PMF of the METE spatial species abundance distribution
spd
Species Power Distribution
plot.sar
Plot the species abundance distribution (SAR), i.e. objects of class sar
sad
METE species abundance distribution
mse
Computes mean squared error for rank or cdf
ipd
Individual Power Distribution
meteNu
Equation of the PMF for the METE species metabolic rate distribution
residuals.meteRelat
Compute residuals between METE predictions and date of a meteRelat object
anbo
Community abundance data for a desert grassland (anza borrego)