Learn R Programming
⚠️There's a newer version (1.2) of this package.Take me there.

meteR (version 1.0)

Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)

Description

Fit and plot macroecological patterns predicted by the Maximum Entropy Theory of Ecology (METE).

Copy Link

Version

Install

install.packages('meteR')

Monthly Downloads

170

Version

1.0

License

GPL-2

Issues

1

Pull Requests

0

Stars

11

Forks

5

Maintainer

Cory Merow

Last Published

November 24th, 2015

Functions in meteR (1.0)

downscaleSAR

Downscale the species area relationship (SAR) or endemics area relationship (EAR)
ebar

Relationship between mean metabolic rate ($\bar{\epsilon}$) and abundance
print.damuth

print.damuth
plot.meteDist

Plot METE distributions and associated data
mseZ

Compute z-score of mean squared error
plot.damuth

Plot the relationship between abundance and metabolic rate, i.e. objects of class damuth
meteESF

meteESF
arth

Arthropod community abundance data
meteTheta

Equation of the PMF for the METE Intra-specific metabolic rate distribution
sipd

Generic method to obtain the species-level individual power distribution (SIPD)
empiricalSAR

Empirical SAR or EAR
meteSAR

Compute METE species area relationship (SAR)
logLikZ

Compute log-likelihood z-score
print.meteESF

print.meteESF
meteDist2Rank

meteDist2Rank
print.meteRelat

Print summaries of meteRelat objects
metePsi

Equation of the PMF for the METE individual metabolic rate distribution
upscaleSAR

upscale SAR
logLik.meteDist

Compute log-likelihood of a meteDist object
meteSSF

meteSSF
metePhi

Equation of the METE species abundance distribution
plot.meteRelat

Plot predicted METE relationships and associated observed relationship seen in data
print.meteDist

Print summaries of meteDist objects
print.sar

print.sar
residuals.meteDist

Compute residuals between METE predictions and date of a meteDist object
meteR-package

Analyses with the Maximum Entropy Theory of Ecology (METE)
ssad

Species Spatial Abundance Distribution
metePi

Equation of the PMF of the METE spatial species abundance distribution
spd

Species Power Distribution
plot.sar

Plot the species abundance distribution (SAR), i.e. objects of class sar
sad

METE species abundance distribution
mse

Computes mean squared error for rank or cdf
ipd

Individual Power Distribution
meteNu

Equation of the PMF for the METE species metabolic rate distribution
residuals.meteRelat

Compute residuals between METE predictions and date of a meteRelat object
anbo

Community abundance data for a desert grassland (anza borrego)