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meteR (version 1.2)
Fitting and Plotting Tools for the Maximum Entropy Theory of Ecology (METE)
Description
Fit and plot macroecological patterns predicted by the Maximum Entropy Theory of Ecology (METE).
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Version
1.2
1.1
1.0
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Install
install.packages('meteR')
Monthly Downloads
160
Version
1.2
License
GPL-2
Issues
1
Pull Requests
0
Stars
11
Forks
5
Repository
https://github.com/cmerow/meteR
Maintainer
Cory Merow
Last Published
June 27th, 2016
Functions in meteR (1.2)
Search functions
logLik.meteDist
Compute log-likelihood of a meteDist object
meteDist2Rank
meteDist2Rank
ipd
Individual Power Distribution
logLikZ
Compute log-likelihood z-score
ebar
Relationship between mean metabolic rate ($\bar{\epsilon}$) and abundance
anbo
Community abundance data for a desert grassland (anza borrego)
meteESF
meteESF
empiricalSAR
Empirical SAR or EAR
downscaleSAR
Downscale the species area relationship (SAR) or endemics area relationship (EAR)
arth
Arthropod community abundance data
mseZ
Compute z-score of mean squared error
meteNu
Equation of the PMF for the METE species metabolic rate distribution
meteSAR
Compute METE species area relationship (SAR)
metePi
Equation of the PMF of the METE spatial species abundance distribution
meteTheta
Equation of the PMF for the METE Intra-specific metabolic rate distribution
meteR-package
Analyses with the Maximum Entropy Theory of Ecology (METE)
meteSSF
meteSSF
plot.damuth
Plot the relationship between abundance and metabolic rate, i.e. objects of class damuth
mse
Computes mean squared error for rank or cdf
metePsi
Equation of the PMF for the METE individual metabolic rate distribution
print.sar
print.sar
print.meteESF
print.meteESF
plot.meteDist
Plot METE distributions and associated data
plot.sar
Plot the species abundance distribution (SAR), i.e. objects of class sar
print.meteRelat
Print summaries of
meteRelat
objects
predictESF
predictESF
print.damuth
print.damuth
residuals.meteDist
Compute residuals between METE predictions and data of a meteDist object
print.meteDist
Print summaries of
meteDist
objects
plot.meteRelat
Plot predicted METE relationships and associated observed relationship seen in data
sipd
Generic method to obtain the species-level individual power distribution (SIPD)
residuals.meteRelat
Compute residuals between METE predictions and date of a meteRelat object
sad
METE species abundance distribution
spd
Species Power Distribution
ssad
Species Spatial Abundance Distribution
upscaleSAR
upscale SAR