pool.reads: Function to pool reads of replicates

Description

Combine reads of replicates within a group.

Usage

pool.reads(files_location)

Arguments

files_location

character; the path to the folder location consisting of tab separated text files

Value

A text file of methylation calls are generated in the "files_location" folder.

Details

The function reads tab separated text files of methylation calls generated from meth.call or user supplied according to the format specified for BSprepare method. It pools all the reads of the replicates within a single group for each cytosine position and creates a file consisting of the cytosines with pooled reads information.

Examples

Run this code

#pool.reads(files_location)