Read dose-response data of specific format from a txt or csv file
readTox(File, light=TRUE)a txt or csv file with dose-response data. a txt file should be tab or space separated; a csv file should be comma separated.
TRUE: the file only contrains doses and responses (light version); FALSE: the file also contains information about experiment design and data type (complex version)
Dose-response data contains the following information: the name of compound, the number of doses, the repititions, and the data type. The file extension needs to be .txt if it's a space or tab separated file. The file extension needs to be .csv if it's a comma-separated values file.
> The light format of the file readTox can read: conc tier1 tier2 tier3 2.50E-07 0.06 0.03 0.07 3.50E-07 0.04 0.07 0.04 5.34E-07 0.07 0.15 0.06 7.68E-07 0.16 0.14 0.10 1.13E-06 0.21 0.26 0.23 1.67E-06 0.34 0.30 0.31 2.50E-06 0.46 0.44 0.48 3.50E-06 0.52 0.59 0.61 5.34E-06 0.73 0.69 0.71 7.68E-06 0.79 0.67 0.78 1.13E-05 0.80 0.72 0.81 1.67E-05 0.82 0.80 0.82
> The complex format of the file readTox can read: cu 12 3 type ID conc tier1 tier2 tier3 1 2.50E-07 0.06 0.03 0.07 2 3.50E-07 0.04 0.07 0.04 3 5.34E-07 0.07 0.15 0.06 4 7.68E-07 0.16 0.14 0.10 5 1.13E-06 0.21 0.26 0.23 6 1.67E-06 0.34 0.30 0.31 7 2.50E-06 0.46 0.44 0.48 8 3.50E-06 0.52 0.59 0.61 9 5.34E-06 0.73 0.69 0.71 10 7.68E-06 0.79 0.67 0.78 11 1.13E-05 0.80 0.72 0.81 12 1.67E-05 0.82 0.80 0.82