mmod (version 0.2.1)

jacknife_populations: Calculate differentiation stats for a jacknife sample of a Genind opject

Description

Makes a series of jacknife samples across populations from a Genind object. This functino resurns a list of genind objects that can then be further processed (see examples).

Usage

jacknife_populations(x, sample_frac = 0.5, nreps = 1000)

Arguments

x

genind object (from package adegenet)

sample_frac

fraction of pops to sample in each replication (default 0.5)

nreps

number of jacknife replicates to run (default 1000)

See Also

Other resample: chao_bootstrap, summarise_bootsrap

Examples

data(nancycats)
obs <- diff_stats(nancycats)
jn <- jacknife_populations(nancycats)
jn.D <- summarise_bootstrap(jn, D_Jost)