RDocumentation
Moon
Learn R
Search all packages and functions
⚠️
There's a newer version (1.3.2) of this package.
Take me there.
mmod (version 0.2.1)
Modern measures of population differentiation
Description
mmod provides functions for measuring population divergence from genotypic data
Copy Link
Copy
Link to current version
Version
Version
1.3.2
1.3.1
1.3.0
1.2.1
1.01
1.0
0.31
0.2.1
0.1.1
Down Chevron
Install
install.packages('mmod')
Monthly Downloads
1,896
Version
0.2.1
License
MIT
Issues
7
Pull Requests
0
Stars
11
Forks
5
Repository
https://github.com/dwinter/mmod
Maintainer
David Winter
Last Published
February 3rd, 2012
Functions in mmod (0.2.1)
Search functions
pairwise_Gst_Hedrick
Calculates pairwise values of Hedrick's G'st
jacknife_populations
Calculate differentiation stats for a jacknife sample of a Genind opject
Gst_Nei
Calculate Nei's Gst using estimators for Hs and Ht
mmod
Modern Measures of Divergence
diff_stats
Calculate differentiation statistics for a genind objects
pairwise_Gst_Nei
Calculates pairwise values of Nei's Gst
summarise_bootsrap
Apply a differentiation statistic to a bootstrap sample
diff_test
An exact test of population differentiation for Genind objects
Gst_Hedrick
Calculate Nei's Gst using estimators for Hs and Ht
pairwise_D
Calculates pairwise values of Jost's D
chao_bootstrap
Produce bootstrap samples from each subpopulation of a genind object
rgenotypes
Randomly create genotypes
harmonic_mean
Harmonic mean
D_Jost
Calculate Jost's D