Mutoss-class

A Mutoss object can store the input for a multiple test procedure and also the output.

The Mutoss package and accompanying mutossGUI package are
designed to ease the application and comparison of multiple
hypothesis testing procedures.

Kornelius Rohmeyer

mutoss

Unified Multiple Testing Procedures

Mutoss-class function

<dl>
    <dt><code>data</code>:</dt><dd>Raw data used in model</dd> <dt><code>model</code>:</dt><dd>link function,error family and design</dd> <dt><code>description</code>:</dt><dd>a general description</dd> <dt><code>statistic</code>:</dt><dd>for Z, T or F statistics</dd> <dt><code>hypotheses</code>:</dt><dd>of class ANY</dd> <dt><code>hypNames</code>:</dt><dd>identifiers for the hypotheses tested</dd> <dt><code>criticalValues</code>:</dt><dd>procedure-specific critical values</dd> <dt><code>pValues</code>:</dt><dd>raw p-values</dd> <dt><code>adjPValues</code>:</dt><dd>procedure-specific adjusted p-values</dd> <dt><code>errorControl</code>:</dt><dd>A Mutoss S4 class of type <code>errorControl</code></dd> <dt><code>rejected</code>:</dt><dd>Logical vector of the output of a procedure at a given error rate</dd> <dt><code>qValues</code>:</dt><dd>Storey's estimates of the supremum of the pFDR</dd> <dt><code>locFDR</code>:</dt><dd>Efron's local fdr estimates</dd> <dt><code>pi0</code>:</dt><dd>Estimate of the proportion of null hypotheses</dd> <dt><code>confIntervals</code>:</dt><dd>Confidence intervals for selected parameters</dd> <dt><code>commandHistory</code>:</dt><dd>commandHistory</dd> </dl> 

Mutoss-class: Class Mutoss

Description

Arguments

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