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netgsa (version 1.0)

Network-based Gene Set Analysis

Description

Functions for carrying out Network-based Gene Set Analysis by incorporating external information about interactions among genes, as well as novel interactions learned from data

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Version

Install

install.packages('netgsa')

Monthly Downloads

282

Version

1.0

License

GPL (>= 2)

Maintainer

Jing Ma

Last Published

December 2nd, 2014

Functions in netgsa (1.0)

netgsaex

Toy example for using NetGSA on a two-class test

cv.covsel

Cross-validation for covsel

NetGSA

Network-based Gene Set Analysis

netgsa-package

Network-based Gene Set Analysis

covsel

Covariance selection

edgelist2adj

Construct an adjacency matrix from an edge list

edgelist

An example edge list

nonedgelist

An example for not-an-edge list