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Tingwei Adeck November 26, 2023

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install.packages('normfluodbf')

Monthly Downloads

557

Version

1.5.2

License

MIT + file LICENSE

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Maintainer

Tingwei Adeck

Last Published

November 28th, 2023

Functions in normfluodbf (1.5.2)

dat_col_names_prime

Title: Attribute(s) naming function.
fluor_threshold_check_raw

Title: A fluorescence quantification Quality Control (QC) function.
normfluodatlite

Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
generic_identifier

Title: A function to append a generic identifier attribute to any data frame, but users supply a name for said attribute.
normfluordbf

Title: Cleans and Normalizes DBF files obtained from experiments using the FLUOstar microplate reader.
fluor_threshold_check

Title: A fluorescence quantification Quality Control (QC) function.
dat_col_names_horizontal

Title: Attribute(s) naming function.
normfluordat

Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
liposomes_216

liposomes_216.
normfluodat

Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
log_transformation

Title: A log transformation function.
normfluodatfull

Title: Cleans and normalizes DAT files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
fluor_threshold_check_na

Title: A missing value (NA) Quality Control (QC) function.
resample_dat

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
norm_z

Title: Z-score standardization or normalization function.
liposomes_218

liposomes_218.
liposomes_221

liposomes_221.
liposomes_215

liposomes_215.
liposomes_227

liposomes_227.
resample_dat_scale_optimus

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_alt

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_optimus_backend

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
min_max_norm

Title: Min-Max normalization on a 0-1 scale.
resample_dat_scale_optimus_na

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
roundfluor

Title: A value rounding function.
ggplot_tnp

Title: A Visualization function.
min_max_norm_percent

Title: Min-Max normalization on a 0-100 scale.
norm_applier

Title: A normalization applier built on lapply.
liposomes_214

liposomes_214.
norm_tidy_dbf

Title: Cleans and Normalizes DBF files obtained from experiments using the FLUOstar Omega microplate reader (from BMG LABTECH).
resample_dat_scale_alt

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
time_attribute

Title: A time attribute generating function
resample_dat_scale

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
unique_identifier

Title: A function to append a unique identifier attribute to any data frame within the normfluodbf package.
resample_dat_scale_alt_bfv

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_alt_bf_na

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_naretainer

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
resample_dat_scale_alt_na

Title: A function to create an attribute or column for each sample loaded into the microplate wells.
actual_cols_used

Title: A function to get the actual columns used in the assay.
clean_odd_cc

Title: DAT file data frame cleaner.
check_dbf

Title: A function to check for DBFs in a directory.
check_dat

Title: A function to check for DATs in a directory.
dat_2

dat_2.
comma_cleaner

Title: Comma Cleaner function.
clean_odddat_optimus

Title: DAT file data frame cleaner.
dat_col_names_optimus

Title: Attribute(s) naming function.
dat_col_names_rigid

Title: Attribute(s) naming function.
dat_6

dat_6.
dat_3

dat_3.
dat_5

dat_5.
dat_4

dat_4.
dat_1

dat_1.
dat_7

dat_7.
decimal_scaling

Title: A decimal scaling function (a machine learning tool).