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occCite (version 0.4.5)

Querying and Managing Large Biodiversity Occurrence Datasets

Description

Facilitates the gathering of biodiversity occurrence data from disparate sources. Metadata is managed throughout the process to facilitate reporting and enhanced ability to repeat analyses.

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Install

install.packages('occCite')

Monthly Downloads

496

Version

0.4.5

License

GPL-3

Issues

Pull Requests

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Repository

https://github.com/hannahlowens/occCite

Maintainer

Hannah Owens

Last Published

November 28th, 2020

Functions in occCite (0.4.5)

occCitation

Occurrence Citations

getBIENpoints

Download occurrence points from BIEN

myOccCiteObject

Results of an occCite search for *Protea cynaroides*

gbifRetriever

Retrieve downloaded GBIF data sets

occCiteData-class

occCite Data Class

occCiteCitation-class

occCite Citation Class

GBIFLoginManager

GBIF Login Manager

getGBIFpoints

Download occurrence points from GBIF

occCiteMap

Generating a map of downloaded points

occQuery

Query from Taxon List

plot.occCiteData

Plotting summary figures for occCite search results

studyTaxonList

Study Taxon List

summary.occCiteData

Summary for occCite data objects

tabGBIF

GBIF Table

prevGBIFdownload

Download previously-prepared GBIF data sets

print.occCiteCitation

Print occCite citation object

taxonRectification

Taxon Rectification

tabulate.occResults

Tabulate occurrence results