Handle error response
Install a DataSHIELD package
Default request response Location handler.
Get the DataSHIELD options
Get a DataSHIELD method
Remove a DataSHIELD option
Get DataSHIELD methods
Remove DataSHIELD method
Verbose option
Default request response handler.
.handleResponseOrCallback
Process response with default handler or the provided one
Check if response content is empty.
dsadmin.set_package_methods
Set DataSHIELD package methods
Array to Markdown
Set variable annotation with a taxonomy term
Data or expression assignment
Remove DataSHIELD methods.
Create a new progress instance with default settings.
Set DataSHIELD method
Remove a Opal session (logout)
Create the opal object
dsadmin.rm_package_methods
Remove DataSHIELD package methods
Remove an asynchronous command
Execute a R script
Output the progress status if option "datashield.progress" is allows to.
List the asynchronous commands
dsadmin.installed_package
Check DataSHIELD package
Simple transformation function of a list into a JSON object/array.
dsadmin.package_description
Get DataSHIELD package description
Get a Opal table as a tibble
Apply the dictionary to a tibble
Install package
Constructs the value for the X-Opal-Auth header
Update the dictionary of a Opal table
Check package is installed
Set DataSHIELD option
Remove a R session from Opal.
Execute a R file script
Apply the annotations to a Opal table
Get the annotations of a Opal table
Returns a list r such that r[[i]] == l[[i]][field] for all i:length(l)
Save a local tibble as a Opal table
Set variable annotation with Harmonization Status term
Opal login
oadmin.installed_packages
List installed packages
Create a new R session in Opal.
oadmin.installed_devtools
Check devtools package
Data assignment
List the annotations
oadmin.package_description
Get package description
Remove package
Download a file
Get an asynchronous command
R script assignment
Utility method to build urls. Concatenates all arguments and adds a '/' separator between each element
Remove DataSHIELD package
dsadmin.package_descriptions
Get DataSHIELD package descriptions
Data assignment to a data.frame
Data assignment to a tibble
Get a vector of values
Verbose flag
Install devtools package
Read a file
Get result of an asynchronous command
Get datasources
Remove a file
Generic REST resource deletion.
Opal report
Logout from Opal(s)
Remove all asynchronous commands
Turn a R markdown file to html.
Get the tasks
Install a package form GitHub
Get taxonomies
Upload a file
Write a file
Get a datasource
Get a resource of a project
Resource assignment
Copy a file
Get file content
Cancel a task
Get the resource references of a project
Get tables of a datasource
List content of a folder
Get a task
Move and/or rename a file
Make a folder
List R symbols
Remove a R symbol (deprecated)
Import a tibble
Get a variable of a table
Get a table of a datasource
Generic REST resource creation.
Generic REST resource getter.
Load package
Wait for a task to complete.
Get projects
Remove a R symbol
Generic REST resource update.
Get variables of a table
Get the vocabularies of a taxonomy
Compare
Get a taxonomy vocabulary
Get a project
Remove a R workspace from a opal.
Save a tibble
Get a taxonomy
Get the R workspaces from a opal.
Save the current session in a opal R workspace.
Get the terms of a vocabulary
Get the values of an entity
Unload package
Wrapper of httr::content()
Get all R session in Opal.
Extract absolute path to the pem file
Extract R session Id from opal object, create a new R session if not found.
Extract JSON
Constructs the value for the Authorization header
Extract opalsid from cookie data frame.
Turn expression into character strings.
Extract label for locale. If not found, fallback to undefined language label (if any).