opossom.tissues

A data set comprising of 12 selected human tissues.

This package translates microarray expression data into metadata
of reduced dimension. It provides various sample-centered and group-centered
visualizations, sample similarity analyses and functional enrichment analyses.
The underlying SOM algorithm combines feature clustering, multidimensional
scaling and dimension reduction, along with strong visualization capabilities.
It enables extraction and description of functional expression modules inherent
in the data.

Henry LoefflerWirth

oposSOM

Comprehensive analysis of transciptome data

opossom.tissues function

The data set is stored in RData (binary) format.

Format

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7307

opossom.tissues: Example data set.

Description

Usage

Arguments

Format

Source

Details