pancor (version 0.1.0)

getExprSet: download exprSet data

Description

download exprSet data

Usage

getExprSet(file = "", outdir = ".", dir = "pub", url = NULL,
  user = NULL, password = NULL)

Arguments

file

one of pancancer_mRNA_exprSet.Rdata panCCLE_mRNA_exprSet.Rdata panGTEX_mRNA_exprSet.Rdata

outdir

data store directory

dir

ftp directory

url

ftp url

user

ftp user

password

ftp password

Value

a .Rdata file in working directory

Examples

# NOT RUN {
temp_dir <- tempdir()
getExprSet(file = "test.txt", outdir = temp_dir)

# }
# NOT RUN {
# According to CRAN, function cannot modify user's home filespace,
# so when run the example, the data will save at the tempdir.
# You can remove the `outdir = tempdir()` to let the .Rdata save to
# your current directory
getExprSet(file = "pancancer_mRNA_exprSet.Rdata", outdir = tempdir())
# }
# NOT RUN {
# }