panGTEX_small

<p>Data are downloaded from <a href="https://gtexportal.org/home/">GTEx</a></p>

datasets

The data of TCGA (The Cancer Genome Atlas), GTEx (Genotype-Tissue Expression),
and CCLE (Broad Institute Cancer Cell Line Encyclopedia) are downloaded and preprocessed.
With the help of 'pancor', one can easily calculate the correlation of two gene in any cancer type.
Reference: Huang, H. (2019) <doi:10.1038/s41586-019-1016-7>.

Zhougeng Xu

pancor

Calculation and Plot of Gene Correlationship in TCGA/GTEx/CCLE

Shipeng Guo

panGTEX_small function

Format

<p>Data are downloaded from <a href='https://gtexportal.org/home/'>GTEx</a></p>

panGTEX_small: GTEx preprocessed data for correlationship analysis

Description

Usage

Arguments

Format

Examples