pathifier (version 1.10.0)
Quantify deregulation of pathways in cancer
Description
Pathifier is an algorithm that infers pathway deregulation
scores for each tumor sample on the basis of expression data.
This score is determined, in a context-specific manner, for
every particular dataset and type of cancer that is being
investigated. The algorithm transforms gene-level information
into pathway-level information, generating a compact and
biologically relevant representation of each sample.