convertSifToSpia

a data.frame of interactions; must have INTERACTION_TYPE column

edges

Convert SIF Interaction Types to SPIA types

The package provides a set of R functions for interacting with
    BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular
    interaction database that are hosted by the Computational Biology Center at
    Memorial Sloan-Kettering Cancer Center (MSKCC). Pathway Commons databases
    include: BIND, BioGRID, CORUM, CTD, DIP, DrugBank, HPRD, HumanCyc, IntAct, KEGG,
    MirTarBase, Panther, PhosphoSitePlus, Reactome, RECON, TRANSFAC.

convertSifToSpia: Convert SIF Interaction Types to SPIA types

Description

Usage

Arguments

Value

concept