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pbatR (version 1.3.4)

Frontend to PBAT to run within R.

Description

This package provides a frontend to the PBAT software, automatically reading in the output from the pbat program and displaying the corresponding figure when appropriate (i.e. PBAT-logrank). Includes support for multiple processes and clusters. For all but the most basic usage, users must download PBAT and accept it's license.

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Version

Install

install.packages('pbatR')

Monthly Downloads

157

Version

1.3.4

License

The license of this R package is GPL. The license of PBAT is free for academic / non-profit use (see full details on the PBAT webpage), and must be downloaded separately from the link below.

Maintainer

Thomas Hoffmann

Last Published

January 29th, 2024

Functions in pbatR (1.3.4)

ped

Pedigree Object
phe

Phenotype Object
pbat.generateData

Data generation
write.pbat

Saving `pbat' Object
pbat

PBAT Graphical and Command Line Interface
power

Power And Sample Size Calculations
pbat.help

Help and Reporting Information
generic

`pbat' Object Generic Routines
obfuscate

Obfuscating Pedigree and Phenotype Files
cluster

Cluster result functions
c2bat

C2BAT
pbat.set

Set Pbat Parameters
clean

Cleaning pbat(), pbat.last(), pbat.m() output.