pbat.clean

pbatObj

plots

DEPRECATED: No longer does anything, deleting files from other (potentially running) PBAT runs can be dangerous.

all.output

Removes many of the temporary output files from communicating with
 PBAT. Make sure you save how PBAT was run for future reference. Most
 useful for simulations.

interface

clean

This R package provides power calculations via internal simulation methods. The package also provides a frontend to the now abandoned PBAT program (developed by Christoph Lange), and reads in the corresponding output and displays results and figures when appropriate. The license of this R package itself is GPL. However, to have the program interact with the PBAT program for some functionality of the R package, users must additionally obtain the PBAT program from Christoph Lange, and accept his license. Both the data analysis and power calculations have command line and graphical interfaces using tcltk.

Thomas Hoffmann

pbatR

Pedigree/Family-Based Genetic Association Tests Analysis and
Power

clean function

<dl> <dt>pbatObj</dt>
<dd>'pbat' object</dd> <dt>plots</dt>
<dd>TRUE/FALSE - delete plot output</dd> <dt>all.output</dt>
<dd>DEPRECATED: No longer does anything, deleting files from other (potentially running) PBAT runs can be dangerous.</dd></dl>

Arguments

Cleaning pbat(), pbat.last(), pbat.m() output. — clean

<dl>

 <dt>pbatObj</dt>
<dd>'pbat' object</dd>

 <dt>plots</dt>
<dd>TRUE/FALSE - delete plot output</dd>

 <dt>all.output</dt>
<dd>DEPRECATED: No longer does anything, deleting files from other (potentially running) PBAT runs can be dangerous.</dd>

</dl>

clean: Cleaning pbat(), pbat.last(), pbat.m() output.

Description

Usage

Arguments

See Also