pbat.status

Provides status information, i.e. if there were any errors.

interface

This R package provides power calculations via internal simulation methods. The package also provides a frontend to the now abandoned PBAT program (developed by Christoph Lange), and reads in the corresponding output and displays results and figures when appropriate. The license of this R package itself is GPL. However, to have the program interact with the PBAT program for some functionality of the R package, users must additionally obtain the PBAT program from Christoph Lange, and accept his license. Both the data analysis and power calculations have command line and graphical interfaces using tcltk.

Thomas Hoffmann

pbatR

Pedigree/Family-Based Genetic Association Tests Analysis and
Power

pbat.status function

<dl> <dt>n</dt>
<dd>Returns the last `n' lines from the status file.
 If n=0, all lines are returned.</dd> <dt>workFirst</dt>
<dd>Whether to check for 
 `./pbatRwork/pbatstatus.txt' or
 `./pbatstatus.txt' first.
 Generally only semi-important internally,
 but set this to true if you just typed
 <code>pbat.unwork()</code>.</dd></dl>

Arguments

PBAT Status of Run — pbat.status

<dl>

 <dt>n</dt>
<dd>Returns the last `n' lines from the status file.
 If n=0, all lines are returned.</dd>

 <dt>workFirst</dt>
<dd>Whether to check for 
 `./pbatRwork/pbatstatus.txt' or
 `./pbatstatus.txt' first.
 Generally only semi-important internally,
 but set this to true if you just typed
 <code>pbat.unwork()</code>.</dd>

</dl>

pbat.status: PBAT Status of Run

Description

Usage

Arguments

See Also