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pdmclass (version 1.44.0)

Classification of Microarray Samples using Penalized Discriminant Methods

Description

This package can be used to classify microarray data using one of three penalized regression methods; partial least squares, principal components regression, or ridge regression.

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Version

Version

1.44.0

License

Artistic-2.0

Maintainer

James W MacDonald

Last Published

February 15th, 2017

Functions in pdmclass (1.44.0)

pdmGenes

A Function to output the Top Ranked Genes from a Penalized Discriminant Classifier
my.svd

A Function to Perform Singular Value Decomposition
svdpls1c

Classify Microarray Data by Partial Least Squares
predict.pls

Classify Observations using Penalized Discriminant Methods
svdr

Classify Microarray Data by Principal Components Regression
pls1c

Function to Fit Modified Helland Algorithm
pdmClass

Function to Classify Microarray Data using Penalized Discriminant Methods
pdmClass.cv

Leave One Out Crossvalidation