pedantics v1.7

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Functions to Facilitate Power and Sensitivity Analyses for Genetic Studies of Natural Populations

Functions for sensitivity and power analysis, for calculating statistics describing pedigrees from wild populations, and for viewing pedigrees.

Functions in pedantics

Name Description
drawPedigree Produce a graphical representation of a pedigree
makePedigreeNumeric Converts a pedigree with individuals specified as factors to a numeric pedigree
pedStatSummary Post-processes output from pedigreeStats
genomesim A function to simulate QTL and/or SNP data.
fpederr Simulates a pedigree with errors and missing data from a complete pedigree.
microsim Simulates microsatellite data across a pedigree.
pedantics-package Tools to facilitate quantitative genetic studies of natural populations, especially with respect to the use of pedigrees in such problems.
rpederr Permutes a pedigree to create a plausible complete pedigree
fixPedigree Manipulating pedigrees to prepare them for requirements of subsequent analyses
pedigreeStats Calculates a range of statistics of pedigrees.
gryphons Example dataset for pedantics examples and titorial
phensim A function to simulated phenotypic data
makePedigreeFactor Converts a numeric pedigee to a pedigree with factors
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Details

Type Package
Date 2018-04-18
License GPL-2 | GPL-3
LazyLoad yes
Packaged 2018-04-18 11:47:06 UTC; michael
Repository CRAN
Date/Publication 2018-04-18 14:23:57 UTC
NeedsCompilation yes

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