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pedantics (version 1.7)

Functions to Facilitate Power and Sensitivity Analyses for Genetic Studies of Natural Populations

Description

Functions for sensitivity and power analysis, for calculating statistics describing pedigrees from wild populations, and for viewing pedigrees.

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Version

Install

install.packages('pedantics')

Monthly Downloads

60

Version

1.7

License

GPL-2 | GPL-3

Maintainer

Michael Morrissey

Last Published

April 18th, 2018

Functions in pedantics (1.7)

drawPedigree

Produce a graphical representation of a pedigree
makePedigreeNumeric

Converts a pedigree with individuals specified as factors to a numeric pedigree
pedStatSummary

Post-processes output from pedigreeStats
genomesim

A function to simulate QTL and/or SNP data.
fpederr

Simulates a pedigree with errors and missing data from a complete pedigree.
microsim

Simulates microsatellite data across a pedigree.
pedantics-package

Tools to facilitate quantitative genetic studies of natural populations, especially with respect to the use of pedigrees in such problems.
rpederr

Permutes a pedigree to create a plausible complete pedigree
fixPedigree

Manipulating pedigrees to prepare them for requirements of subsequent analyses
pedigreeStats

Calculates a range of statistics of pedigrees.
gryphons

Example dataset for pedantics examples and titorial
phensim

A function to simulated phenotypic data
makePedigreeFactor

Converts a numeric pedigee to a pedigree with factors