pedantics (version 1.7)

pedStatSummary: Post-processes output from pedigreeStats

Description

Generates a manageable summary of pedigree-wide statistics reported by pedigreeStats, either for a single pedigree or for a comparison between pedigrees

Usage

pedStatSummary(pedStats,pedStats2=NULL)

Arguments

pedStats

An output data list from pedgireeStats

pedStats2

An optional output data list from pedgireeStats

Value

Returns a table of numbers of records, maternities, paternities, pairwise sibship relationships, numbers of different classes of grand-parental relationships, pedigree depth, number of founders, mean subship sizes, simple statistics of numbers of inbred and non-inbred indivdiuals, and proportions of pairwise relationship coefficients equal to or greater than several thresholds.

References

Morrissey, M.B, and A.J. Wilson, 2009. pedantics, an R package for pedigree-based genetic simulation, and pedigree manipulation, characterisation, and viewing. Molecular Ecology Resources.