Usage
as.loci(x, ...)
## S3 method for class 'genind':
as.loci(x, ...)
genind2loci(x)
## S3 method for class 'data.frame':
as.loci(x, allele.sep = "/", col.pop = "none", col.loci = NULL, ...)
loci2genind(x)
## S3 method for class 'factor':
as.loci(x, allele.sep = "/", ...)
## S3 method for class 'vector':
as.loci(x, allele.sep = "/", ...)
Arguments
x
an object of class "loci" or "genind", a data
frame, a factor, or a vector.
allele.sep
the character(s) separating the alleles for each locus
in the data file (a slash by default).
col.pop
specifies whether one of the column of the data file
identifies the population; default "none", otherwise an
integer giving the number of the column.
col.loci
a vector of integers specifying the indices of the
columns that are loci. By default, all columns are taken as loci
except one labelled "population", if present.
...
further arguments to be passed to or from other methods.