countQC

Count how many QC samples are in each of the batches, and if it doesn't match the number specified.

Provides randomization using permutation for applications.  To provide a Quality Control (QC) check, QC samples can be randomized within strata.  A second function allows for the ability to ”switch” samples to meet set requirements and perform a certain amount of minimization on these switches.  The functions are flexible for users by specifying strata size and number of QC samples per strata.  The randomization meets the following requirements
• QC sample requirements: QC samples not adjacent, QC
samples from same mother must follow certain patterns.
• Matched sample sets must be within a single strata, and next
to each other.

Michelle Mellers

permRand

Permutation Randomization

Thaddeus Haight

countQC function

<dl><dt>dataS</dt>
<dd>Test dataset.</dd>
<dt>QCN</dt>
<dd>Number of QC samples per batch.</dd></dl>

Arguments

Number of QC in each batch. — countQC

<dl>

<dt>dataS</dt>
<dd>Test dataset.</dd>


<dt>QCN</dt>
<dd>Number of QC samples per batch.</dd>

</dl>

countQC: Number of QC in each batch.

Description

Usage

Value

Arguments

Examples