Data Pony 625

Format fasta

Great pony 625 EIAV dataset is published by Baccam, P., et al. (2003),
  and they are also available on NCBI database.
  This is a follow-up study of <code>Data Pony 618</code>.

datasets

data.fasta.pony

Phylogenetic clustering (phyloclustering) is an
        evolutionary Continuous Time Markov Chain model-based approach
        to identify population structure from molecular data without
        assuming linkage equilibrium. It provides a convenient
        implementation of phyloclustering for DNA and SNP data, capable
        of clustering individuals into subpopulations and identifying
        molecular sequences representative of those subpopulations. It
        is designed in C for performance, interfaced with R for
        visualization, and incorporates other popular open source
        software, ms, seq-gen and Hap-Clustering for simulating data
        and additional analyses. See the phyclust website for more
        information, documentations and examples.

WeiChen Chen

phyclust

Phylogenetic Clustering (Phyloclustering)

data.fasta.pony function

A text file in fasta format is stored in the data subdirectory.

data.fasta.pony: Great pony 625 EIAV rev dataset in the fasta format

Description

Arguments

format

Details

References

See Also

Examples