phyclust (version 0.1-9)

data.phylip.pony: Great pony 524 EIAV rev dataset in the phylip format

Description

Great pony 524 EIAV dataset is published by Baccam, P., et al. (2003), and they are also available on NCBI database. There is a follow-up study, Data Pony 625.

format

A text file in phylip format is stored in the data subdirectory.

Details

EIAV rev dataset contains 146 nucleotide sequences and 405 sites.

References

Phylogenetic Clustering Website: http://thirteen-01.stat.iastate.edu/snoweye/phyclust/

Belshan, M., et al. (2001) Genetic and Biological Variation in Equine Infectious Anemia Virus Rev Correlates with Variable Stages of Clinical Disease in an Experimentally Infected Pony, Virology, 279, 185-200.

See Also

read.fasta.

Examples

data.path <- paste(.libPaths()[1], "/phyclust/data/pony524.phy", sep = "")
# edit(file = data.path)
my.pony.524 <- read.phylip(data.path)
str(my.pony.524)