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picasso (version 0.4.7)

Pathwise Calibrated Sparse Shooting Algorithm

Description

Implement the pathwise calibrated sparse shooting algorithm (PICASSO) for high dimensional regularized sparse linear regression, sparse logistic regression, and sparse undirected graphical model estimation. As a pathwise coordinate optimization algorithm, PICASSO exploits warm start initialization, active set updating, and strong rule for coordinate preselection to boost computation, and attains a linear convergence to a unique sparse local optimum with optimal statistical properties. Moreover, users can choose different regularizers, including L1, MCP, and SCAD regularizers. The computation is memory-optimized using the sparse matrix output.

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Version

Install

install.packages('picasso')

Monthly Downloads

76

Version

0.4.7

License

GPL-2

Maintainer

Xingguo Li

Last Published

September 15th, 2015

Functions in picasso (0.4.7)

plot.lasso

Plot Function for "lasso"
coef.lasso

Extract Model Coefficients for an object with S3 class "lasso"
predict.lasso

Prediction for an object with S3 class "lasso"
print.logit

Print Function for an object with S3 class "logit"
print.lasso

Print Function for an object with S3 class "lasso"
coef.logit

Extract Model Coefficients for an object with S3 class "logit"
picasso

Pathwise Calibrated Sparse Shooting Algorithm
scio.plot

Graph visualization for an object with S3 class "scio"
scio.generator

Data generator for sparse undirected graph estimation.
plot.scio

Plot Function for "scio"
plot.logit

Plot Function for "logit"
plot.sim

Plot Function for "sim"
picasso-package

picasso: Pathwise Calibrated Sparse Shooting Algorithm
predict.logit

Prediction for an object with S3 class "logit"
print.scio

Print Function for an object with S3 class "scio"
print.sim

Print Function for for an object with S3 class "sim"
eyedata

The Bardet-Biedl syndrome Gene expression data from Scheetz et al. (2006)