plateCore (version 1.30.0)

panel.xyplot.flowPlate: Lattice-flowViz style panel function for flowPlate xyplot.

Description

This function should not be called directly, use xyplot.

Usage

panel.xyplot.flowPlate(x, 
				frames,
				channel.x, channel.y,
				channel.x.name, channel.y.name, 
				filter = NULL,
				filterResults = NULL,
				displayFilter = TRUE,
				pch, smooth,
				wellAnnotation = NULL,
				col = superpose.symbol$col,
				...)

Arguments

x

character

frames

flowFrames

channel.x

xyplot channel.x parameter

channel.y

xyplot channel.y parameter

channel.x.name

xyplot channel.x.name parameter

channel.y.name

xyplot channel.y.name parameter

filter

xyplot filter parameter

filterResults

xyplot filterResults parameter

displayFilter

xyplot displayFilter parameter

pch

xyplot pch parameter

smooth

xyplot smooth parameter

wellAnnotation

wellAnnotation data.frame

col

xyplot col parameter

...

optional arguments

See Also

See Also xyplot

Examples

library(plateCore)
data(plateCore)

# Create a flowPlate from the sample data in plateCore
fp <- flowPlate(pbmcPlate,wellAnnotation,plateName="P1")

## Create a rectangle filter
rectGate <- rectangleGate("FSC-H"=c(300,700),"SSC-H"=c(50,400))

xyplot(`SSC-H` ~ `FSC-H` | as.factor(name), 
	fp[1], smooth=FALSE, filter=rectGate, displayFilter=FALSE)