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pvclust (version 1.3-2)

Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling

Description

An implementation of multiscale bootstrap resampling for assessing the uncertainty in hierarchical cluster analysis. It provides AU (approximately unbiased) p-value as well as BP (bootstrap probability) value for each cluster in a dendrogram.

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Version

Install

install.packages('pvclust')

Monthly Downloads

6,285

Version

1.3-2

License

GPL (>= 2)

Maintainer

Ryota Suzuki

Last Published

December 22nd, 2014

Functions in pvclust (1.3-2)

pvclust

Calculating P-values for Hierchical Clustering

print.pvclust

Print Function for Pvclust Object

pvpick

Find Clusters with High/Low P-values

seplot

Diagnostic Plot for Standard Error of p-value

lung

DNA Microarray Data of Lung Tumors

msfit

Curve Fitting for Multiscale Bootstrap Resampling

plot.pvclust

Draws Dendrogram with P-values for Pvclust Object

msplot

Drawing the Results of Curve Fitting for Pvclust Object