qtl (version 1.38-4)

plot.scanoneboot: Plot results of bootstrap for QTL position

Description

Plot a histogram of the results of a nonparametric bootstrap to assess uncertainty in QTL position.

Usage

## S3 method for class 'scanoneboot':
plot(x, \dots)

Arguments

x

An object of class "scanoneboot", as output by scanoneboot.

...

Passed to the function hist when it is called.

Value

• None.

Details

The function plots a histogram of the bootstrap results obtained by scanoneboot. Genetic marker locations are displayed by vertical lines at the bottom of the plot.

See Also

scanone, summary.scanoneboot

Examples

data(fake.f2)
fake.f2 <- calc.genoprob(fake.f2, step=1)

out.boot <- scanoneboot(fake.f2, chr=13, method="hk")
out.boot <- scanoneboot(fake.f2, chr=13, method="hk", n.boot=50)

summary(out.boot)
plot(out.boot)