r3Cseq (version 1.18.0)

calculateRPM: calculate read per million (RPM)

Description

Normalize 3C-Seq data by transforming raw reads to read per million per each region

Usage

calculateRPM(object,normalized_method=c("powerlawFittedRPM","normalRPM"))

Arguments

object

r3Cseq object

normalized_method

character. method of normalization (default=powerlawFittedRPM)

See Also

contrRPM, expRPM, calculateBatchRPM

Examples

#See the vignette